People
People
Gary Ruvkun is Professor of Genetics at Harvard Medical School, a recent recipient of the Gairdner, Lasker, and Benjamin Franklin awards, and a member of the National Academy of Sciences.
His lab uses C. elegans molecular genetics and genomics to study problems in developmental biology and physiology with a focus on RNAi and microRNA pathways, metabolism, and aging. He is also PI of an effort to build a life detection instrument for Mars.
Gary Ruvkun, Ph.D.
Lab Stats
RESEARCH AREAS C. elegans, RNA, metabolism, life on Mars
SIZE ~29 people including 3 grad students and 17 postdocs
location Boston, Massachusetts
MASCOT Papushkin, a Cavalier King George Spaniel
Education SB and SM, MIT; Sc.D. Harvard-MIT Division of Health Sciences & Technology
I am leading development of the SETG life detection instrument for Mars. I apply engineering and computational tools to facilitate the study of biological systems, including sequence analysis, automation of high-throughput screening, and aging.
chrisc@mit.edu, +1-617-253-0786, http://web.mit.edu/chrisc/www/
Christopher E. Carr
Research Scientist (MIT)
Education B.S. and Ph.D. at UCLA
Interests Identifying novel molecular determinates of aging and age-related diseases
When not in the lab I enjoy watching whatever my Tivo has recorded for me, taking naps, and dreaming of the warm weather in sunny California.
curran@molbio.mgh.harvard.edu, +1-617-724-7081
Sean P. Curran
Research Fellow
Education B.S., M.S., Chemistry Leiden University, The Netherlands; Ph.D., Utrecht University, The Netherlands
Interests Mechanism and function of small RNA-mediated processes in C. elegans
I am interested in how small RNAs silence their targets. Currently, using both genetic mutants and a genome-wide RNAi screen, I am analyzing the negative regulation of RNAi in C. elegans. Through these analyses I hope to gain more insight into the RNAi pathway and into the function of small RNAs in C. elegans.
fischer@molbio.mgh.harvard.edu, +1-617-643-3319
Sylvia E. J. Fischer
Research Fellow
Education B.Sc. Biochemistry at University of Lisbon, Portugal; Ph.D. University of Lisbon/Northwestern University
I am interested in a group of toxic RNA species, containing nucleotide repeats in non-coding regions. Expansions of non-coding nucleotide repeats have been associated with a number degenerative disorders. My research focuses on the identification of pathways and mechanisms that regulate this RNA-dependent pathogenic process.
garcia@molbio.mgh.harvard.edu, +1-617-643-3321
Interests Enjoying the simple pleasures of life, especially my family, home and friends
I came to MGH to work for Dr. Gary Ruvkun in the Department of Molecular Biology in 1998. It is a pleasure to work with such wonderful, intelligent and caring people. Before my arrival at MGH I was the proprietor of an ice cream franchise in Newton, MA. My husband and I also own a catering business, Boston Festive Concessions.
sacchetti@molbio.mgh.harvard.edu, +1-617-726-5956
Diane Sacchetti
Administrative Assistant
Former Postdocs
Alex Soukas
Andy Samuelson
Devin Parry
Alison Frand
Ho Yi Mak
John Kim
Ilya Ruvinsky
Patrick Hu
Weiqing Li
Scott Kennedy
Tom Isenbarger
Sylvia Lee
Kaveh Ashrafi
Amy Pasquinelli
Cathy Wolkow
Sarah Pierce
Raymond Lee
Frank Slack
Oliver Hobert
Ji Ying Sze
Ilho Ha
Scott Ogg
Koutarou Kimura
Garth Patterson
Ralf Baumeister
Ann Sluder
Shoshanna Gottlieb
David Greenstein
Prema Arasu
Thomas Bürglin
Michael Finney
Assistant Professor, Harvard Medical School/MGH
Assistant Professor, University of Rochester
Biology Teacher, The Lakeside School, Seattle Washington
Assistant Professor of Biochemistry, UCLA
Assistant Investigator, Stowers Institute
Assistant Professor, Life Sciences Institute at U. of Michigan
Assistant Professor, Dept. Ecology and Evolution, University of Chicago
Assistant Professor, Life Sciences Institute at U Michigan
Assistant Professor, Dept of Biological Structure, U Washington
Assistant Professor, Dept of Pharmacology, U Wisconsin
University of Wisconsin School of Law
Assistant Professor, Dept of Molecular Biology and Genetics, Cornell University (Searle)
Assistant Professor, Dept of Physiology, UCSF (Burroughs Wellcome Award)
Assistant Professor, Dept of Biology, UC San Diego (Searle, Rosalind Franklin Award)
Assistant Professor, National Institute of Aging, Baltimore (Ellison Scholar)
Senior Research Associate, King lab at University of Washington
Curator, C. elegans database, Caltech
Associate Professor, Biology Dept, Yale University (Ellison Scholar)
Professor of Biochemistry and HHMI at Columbia University P&S (Searle)
Associate Professor of Pharmacology, Albert Einstein School of Medicine
Professor of Biochemistry, Inje University, Korea
Director of Project Management, Arresto Biosciences, Palo Alto
Assistant Professor, National Institute of Genetics, Mishima, Japan
Assistant Dean at Rutgers University
Professor, University of Freiburg, Germany
Director of Biology, Scynexis, Research Triangle Park
School teacher in Philadelphia
Associate Professor of Genetics, Univ of Minnesota
Associate Professor of Veterinary Medicine, U North Carolina
Associate Professor, Karolinska Institute, Södertörns högskola, Stockholm
Former Chief Scientist & Principal, MJ Research, now venture capital
Former Graduate Students
Harrison Gabel
Maurice Butler
Gabe Hayes
Duo Wang
Gisela Sandoval
Brenda Reinhart
Suzanne Paradis
Heidi Tissenbaum
Jason Morris
Allison Koweek
Bruce Wightman
Postdoctoral Fellow, Greenberg Lab, Harvard University
Medical Writer, BGB New York
Postdoctoral work in the Ruvkun lab for another year
Strategic Decisions Group, New York
Resident in Psychiatry at Univ of Chicago
Postdoctoral research with Kathy Barton at Stanford
Assistant Professor, Brandeis University
Associate Professor, U. of Massachusetts at Worcester (Burroughs Wellcome Award)
Assistant Professor, Fordham University, NYC
Personal organizer
Associate Professor of Biology, Muhlenberg College
In reverse order of departure
In reverse order of departure
To Arrive
Postdocs:
Marty Newman, from Hammond lab at University of North Carolina
Susana Maria D. A. Garcia
Research Fellow
Education B..S. Elec. Eng., UT-Austin; M.S/Ph.D., Biomedical Engineering, Cornell University
Interests Life on Mars, micro/nanofabrication, microfluidics, biosensors, web design, science education outreach
I am developing a sample preparation module and related microfludics for the SETG instrument. I previously worked on a portable real-time PCR system for pathogen detection and functionalized gold-coated silicon nitride cantilevers for the characterization of forces involved in single-cell responses. In my spare time, I enjoy puzzles, web design, travel, photography, spending time with friends and family, and science outreach activities.
clui@mit.edu, +1-617-643-2910, http://web.mit.edu/clui/www/
Clarissa S. Lui
Postdoctoral Associate (MIT)
Education B.A., Pomona College; Ph.D., University of California at Berkeley
I work with the Ruvkun and Ausubel labs, in collaboration with the Chemical Biology Platform and the Imaging Platform at the Broad Institute, to develop automated screening technology and methods to perform C. elegans RNAi and chemical compound screens. We use automated worm sorting, liquid handling, image acquisition and image analysis to carry out high throughput screens yielding high content data. We are currently exploring 1) RNAi screens to identify novel genes involved in metabolism and 2) chemical compound screens to identify novel anti-infectives as models to develop generally applicable methodologies to perform a wide range of screens using C. elegans as a model organism.
aconery@molbio.mgh.harvard.edu, +1-617-643-3413
Annie Conery
Research Associate
Education BA, Biological Sciences, German Area Studies, Cornell University; PhD, Genetics, Harvard University
Interests microRNAs, development, classical music, gardening, tennis
I am interested in how microRNAs regulate the development of C. elegans. I have focused on how let-7 and its paralogs act together to direct the terminal differentiation of the stem-cell-like hypodermal seam cells and exit from the molting cycle. I am also elucidating how the transcriptional programs that direct these events are carried out.
hayes@molbio.mgh.harvard.edu, +1-617-388-1961
Gabriel Hayes
Research Fellow
Education Harvard College Undergraduate
I am working under the guidance of Sylvia Fischer and Chi Zhang to identify negative regulators of RNA interference in C. elegans.
Alexia Hwang
Undergraduate Researcher
Education B.A., Washington Univ., St. Louis; B.A. and M.Sc., Oxford University; PhD. in planetary science, Massachusetts Institute of Technology.
Interests Global warming on Mars, biodiversity of inaccessible ecosystems
For the past two years, Sarah has helped develop the SETG life detection instrument for a future mission to Mars; prior to that, she completed field seasons in Antarctica, Australia and Madagascar, conducted research at the Niels Bohr Institute in Copenhagen, and worked at mission control for the NASA Opportunity and Spirit Mars Rovers. Sarah also co-founded Common Hope for Health, a non-profit organization dedicated to alleviating healthcare deficiencies in Kenya, and she serves as a consultant at United Nations climate change negotiations. She is a Goldwater, Truman and Rhodes Scholar, and a National Science Foundation Graduate Fellow. Sarah is currently on leave, working as a White House Fellow in the Office of Science and Technology Policy.
Sarah Stewart Johnson
Junior Fellow, Harvard Society of Fellows
Education BS, MS, Rostov State University; PhD, University of Wyoming
I work in the Ausubel and Ruvkun labs, using C. elegans to study the conserved mechanisms of organismal defenses to stresses and infection with pathogens. In my spare time, I enjoy reading, hiking and swimming.
Natasha Kirienko
Research Fellow
Education BS Biology, Trinity College
ford@molbio.mgh.harvard.edu, +1-617-643-3413
Jonah Larkins-Ford
Research Technologist
Education A.B., Princeton University, Ph.D., University of California, San Francisco
Interests Appetite regulation and behavioral responses to physiologic stress
I am interested in physiologic stress: the ways in which environment imposes stress on an organism, how stress is sensed at a cellular level, and the mechanisms by which stress signals are relayed to the nervous system to produce a highly adaptive dispersal behavior.
jmelo@molbio.mgh.harvard.edu, +1-617-643-3322
Justine Melo
Research Fellow
Education Ph.D., Oregon State University
Interests RNA silencing pathways
I am interested in the mechanisms by which microRNAs silence target messanger RNAs and how transcripts are routed, or avoid routing, into RNA silencing pathways involving small interfering RNAs. Outside of the lab I enjoy snow/skate/surfboarding, swimming in the ocean, indie rock, folk rock, rock climbing, and exploring boston by bike.
Tai Montgomery
Research Fellow
Education B.S., Nat. Univ. of Misiones, Argentina ; Ph.D. Univ. of Buenos Aires, Argentina
For millions of years, animals with genes predisposing them to eat a lot and gain weight, as well as to distinguish nutritious from deficient diets, and to endure starvation, would have survived famines and enjoyed an evolutionary advantage. The shared ancestry of Caenorhabditis elegans and humans supports our search for genes that control eating, food choices, and fat accumulation. I aim to discover and characterize novel conserved genes that regulate the selection, intake, and storage of nutrients in C. elegans.
Eyleen O’Rourke
Research Fellow
Education BS Biological Sciences, UC Davis; PhD Molecular and Cell Biology, UC Berkeley
Interests small RNAs, chromatin structure, germ-line organization
I am characterizing factors involved in transposon silencing and endogenous small RNA pathways in C. elegans using genetic, cytological, and biochemical methods.
Carolyn Phillips
Research Fellow
Education B.S. Chemistry and Biology, Caltech; Ph.D. Biophysics, Harvard University
Interests Small RNA pathways, protein-nucleic acid interactions, xenosensing
Yan Qi
Postdoctoral Associate
Education Dipl-Biochem, Univ. of Tuebingen and Max Planck Inst. for Biochemistry in Martinsried, Germany; PhD, Molecular Biology, IMP, Vienna, Austria
Interests Regulation of lifespan and/or aging.
I am interested in the molecular mechanisms that control the rate of aging and thereby lifespan of eukaryotic organisms. Outside the lab I enjoy various sports and photography.
Christian G. Riedel
Research Fellow
Education B.S., Biology, Lock Haven Univ.; M.S., Microbiology, Univ. of New Hampshire.
Interests bacteria, life on Mars, host-microbe interactions: symbioses and pathogenicity
rowedder@molbio.mgh.harvard.edu,+1-617-643-2910
Holli Rowedder
Research Technician
Education B.A., Biology, Brown University; M.A., Science Education, NYU
Interests Developmental Biology, Genetics, Mechanical Machines, Bugs, Food, Education and People!
As a model of a complex developmental program I investigate how C. elegans determines when to molt and when not to. I am also interested in how the when of molting is coordinated with the how across different tissues and in different environmental contexts. This worm usually molts four times during its development and then stops once it reaches sexual maturity; some components of the molting cycle and machinery are conserved amongst the four molts, and some are unique. I have identified a novel heterochronic gene that is required both for the completion of a molt as well as their cessation in adults; significantly it is highly conserved in humans.
Sascha Russel
Graduate Student
Education B.S. Microbiol. & B.S.M.B.B., Univ. of Idaho; Ph.D., Washington Univ. in St. Louis
Interests Influence of natural microbes on host metabolism and physiology
C. elegans, like us, encounters a broad range with microbes over its lifetime. To survive, C. elegans has adapted to be highly tuned to microbial cues that allow it discriminate friend from foe. I utilize lab-raised strains that have been domesticated on E. coli plus their wild cousins and naturally associated microbes to identify conserved host-microbial response pathways that influence C. elegans physiology and metabolism. Outside of the lab, I enjoy photography, hiking, softball, cooking, urban exploration and home renovation.
Buck Samuel
Research Fellow
Education B.S. Tsinghua University
Interests Regulation and function of microRNAs
I am interested in how the biogenesis and function of microRNAs are regulated through the worm development.
shi@fas.harvard.edu, +1-617-726-5973
Zhen Shi
Graduate Student
Education B.S. in Crop Biotechnology and Molecular Biology, University of Illinois UIUC
Interests longevity regulation, weight lifting, cooking, free food acquisition specialist
My goal is to elaborate the contributions of specific stress response pathways to the regulation of longevity in C. elegans. We attempt to study these pathways in a context similar to those in which the pathways evolved: as mechanisms for the worm to respond to environmental and xenobiotic stress.
David Shore
Graduate Student
Education B.Sc. Tel-Aviv University. Israel; M.Sc, Bioinformatics, Weizmann Institute of Science, Israel; Ph.D, Life Sciences, Weizmann Institute of Science, Israel
Interests small RNA-mediated pathways, MicroRNAs, RNAi, Phylogenetic profiling, bioinformatics, genomic data
Several recent studies have sought to identify novel genes in the small RNA-mediated pathways. Even as these gene lists are highly likely to contain novel candidates the limited overlap of these screens may indicate a large false positive rate and may reflect limited sensitivity and specificity. In an effort to more comprehensively identify genes that contribute to small RNA pathways, I experimentally and computationally collect different genome-scale data sets including: Phylogenetic profiles, protein-protein interaction, expression databases, RNAi phenotypes, genetic interactions, interolog interactions, mass spectrometry data and RNAi screens to detect genes involved in microRNA and siRNA. I am applying various bioinformatics and statistical methods to evaluate each dataset’s predictive power and integrate the different resources and establishing a list of high-confidence candidate.
tabach@molbio.mgh.harvard.edu, +1-617-643-0029
Yuval Tabach
Research Fellow
Education S.B., Nuclear Engineering (MIT) (expected)
Interests Astrobiology, ionizing radiation, collider physics, community involvement
I am exploring the effects of cosmic radiation on reagents for the SETG team. We hope to show that PCR reagents are robust against ionizing radiation comparable to that expected on a Mars flight.
cyrusv@mit.edu, +1-706-587-3715
Cyrus Vafadari
Undergraduate Researcher (MIT)
Education B.S., Peking University; Ph.D., University of Rochester
Interests Aging and human lifespan
Aging is a universal phenomenon in living organisms ranging from yeast to human. Many physiological activities such as energy metabolism, reproductive probabilities and tissue repair are disturbed with advancing age. Using C. elegans as a model, I am interested in investigating the molecular mechanisms underlying late-onset obesity, age-associated reproductive senescence and late defect in wound healing.
Meng Weng
Research Fellow
Education B.S., Fudan University; Ph.D., Wadsworth Center
Interests Soma-germline distinction and its connection with RNAi
In metazoans, soma and germline carry distinct functions. Recently, our lab showed that this distinction requires the worm homologue of the Retinoblastoma gene, lin-35. lin-35/Rb mutants misexpress germline-specific markers in the soma. These worms are also more efficient at RNAi and show abnormal RAS activation. I wish to use genetic as well as functional genomic methods to understand how Rb prevents soma from germlinizing, and whether there is any connection between germlinization, RNAi and RAS signaling.
Xiaoyun Wu
Research Fellow
Education Bachelor of Medicine, Peking University Health Science Center; Ph.D., Johns Hopkins University
My research interest is focused on characterization of the negative regulation of the RNAi pathway using C. elegans neurons as a model system. I am carrying out a drug-based selection screen and an RNAi-based enhancer screen to systematically identify negative regulators antagonizing the RNAi response, and am characterizing their functions by genetic and biochemical means. My passions outside the lab are gardening, reading books and spending time with my family and friends.
Chi Zhang
Research Fellow
Education Harvard College Undergraduate
Ellen Rim
Undergraduate Researcher
Education B.Sc. Biological Sciences and M.Sc. Biosciences and Biotechnology at Univ. of the North of Rio de Janeiro State, Rio de Janeiro, Brazil
guinevere@molbio.mgh.harvard.edu, +1-617-643-3322
Guinevere Lourenco
Research Technician
Education B.S. Biochemistry, UNC Chapel Hill; Ph.D. Biomedical Sciences, UC San Diego
Interests Small RNA pathways
I am interested in the mechanisms by which small RNA-directed silencing pathways sense and respond to environmental signals, and in turn, how messenger RNAs are selectively targeted for silencing during these processes.
Robbie Dowen
Postdoctoral Associate
Education Ph.D., Harvard-MIT Division of Health Sciences and Technology
Interests DNA sequencing, Bioinformatics, Microbiology
As part of the SETG team, I am interested in applying the latest sequencing technologies to help us understand diseases with unknown or suspected infectious etiology and improve healthcare.
Ting Zhu
Postdoctoral Associate